Contents

Tutorials and lecture links

Below you can find a list of all the topics covered by the workshop and links to their respective tutorials and lectures. Please note that not all topics have a tutorial associated with them, and are only covered by a lecture. Lectures should be considered short introductions to each topic, while the tutorials themselves contain all of the material covered by the workshop.


Topic Lecture Tutorial
Introduction
Data management
Git
Conda
Snakemake
Nextflow
Quarto
Jupyter
Containers
Putting it all together
Markdown
Take-down