Contents

RaukR 2024 • Advanced R for Bioinformatics

Course materials including presentations (slides) and practical exercises (labs)
Topic Presenter Links
WEEK 1
10-Jun-2024 (Mon)
Introduction to RaukR Marcin Kierczak, Sebastian DiLorenzo
Best Coding Practices in R Marcin Kierczak, Sebastian DiLorenzo Slides, Lab
Literate programming with Quarto Roy Francis Slides, Lab
Debugging, Profiling and Optimization Marcin Kierczak Slides, Lab
11-Jun-2024 (Tue)
Object-oriented programming Marcin Kierczak Slides, Lab
git with R Sebastian DiLorenzo Slides, Lab
Plotting with ggplot2 Roy Francis Slides, Lab
12-Jun-2024 (Wed)
Tidyverse Marcin Kierczak Slides, Lab
Futurverse 1 Henrik Bengtsson, UCSF Web
13-Jun-2024 (Thu)
How to repeat yourself with Purrr Jenny Bryan, Posit Repo
Web apps with Shiny Roy Francis Slides, Lab
14-Jun-2024 (Fri)
R Packages Jenny Bryan, Posit Repo
reticulate: Combining R with Python Nina Norgren Slides, Lab
WEEK 2
17-Jun-2024 (Mon)
Statistics and machine learning in R Nikolay Oskolkov Slides, Lab
Futurverse 2 Henrik Bengtsson, UCSF Web
18-Jun-2024 (Tue)
Project environments using Renv Roy Francis Slides

Slides Labs