DDLS Population genomics in practice
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PGIP 2023 • Population Genomics in Practice

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Slides

Population genomics in practice
What is population genomics?
Per Unneberg
Population genetics
Foundations
Per Unneberg
Simulation
Primer on the coalescent and forward simulation
Per Unneberg
Variant calling
From sequence data to variant call set
Per Unneberg
Variant filtering
From raw variant calls to high-quality call sets
Per Unneberg
Genetic diversity
Theory and practice
Per Unneberg
Population structure
Principal Component Analysis, Admixture and F-statistics
Nikolay Oskolkov, (uses material from lectures of Ben Peter, Anders Albrechtsen, Ida Moltke, Graham Coop)
Demographic inference
Andre Soares
Selection
Jason Hill
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2023 NBIS | GPL-3 License
 
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