Breaks are planned for approximately 10:15 and 15:00 every day.
| Time |
Topic |
Instructor |
02-Mar-2026MonOnline |
| 09:00 - 09:30 |
Welcome |
Martin Dahlö |
| 09:30 - 10:30 |
Intro to Linux |
Martin Dahlö |
| 10:30 - 12:00 |
Intro to Linux |
Martin Dahlö |
| 12:00 - 13:00 |
Lunch |
|
| 13:00 - 14:00 |
Intro to HPC cluster |
Martin Dahlö |
| 14:00 - 17:00 |
Intro to HPC cluster |
Martin Dahlö |
03-Mar-2026TueOnline |
| 09:00 - 09:30 |
File types in Bioinformatics |
Martin Dahlö |
| 09:30 - 11:00 |
File types in Bioinformatics |
Martin Dahlö |
| 11:00 - 12:00 |
Better terminal experience |
Martin Dahlö |
| 12:00 - 13:00 |
Lunch |
|
| 13:00 - 14:00 |
Quality control |
Marcel Martin |
| 14:00 - 15:00 |
Advanced Bash |
Martin Dahlö |
| 15:00 - 17:00 |
Advanced Bash |
Martin Dahlö |
04-Mar-2026WedOnline |
| 09:00 - 12:00 |
NGS tech & challenges |
Adam Ameur & Johanna Lagensjö |
| 12:00 - 13:00 |
Lunch |
|
| 13:00 - 14:00 |
Variant-calling workflow |
Diana Ekman |
| 14:00 - 17:00 |
Variant-calling workflow |
Diana Ekman |
05-Mar-2026ThuOnline |
| 09:00 - 09:30 |
GATK best practices |
Diana Ekman |
| 09:30 - 12:00 |
Variant-calling workflow |
Diana Ekman |
| 12:00 - 13:00 |
Lunch |
|
| 13:00 - 14:30 |
RNA-Seq workflow |
Roy Francis |
| 14:30 - 17:00 |
RNA-Seq workflow |
Roy Francis |
06-Mar-2026FriOnline |
| 09:00 - 12:00 |
RNA-Seq workflow |
Roy Francis |
| 12:00 - 13:00 |
Lunch |
|
| 13:00 - 14:00 |
Data management practices |
|
| 14:00 - 14:15 |
NBIS |
|
Date Venue Slides Lab Video