|
Time
|
Topic
|
Teacher
|
|
11-Mar-2024MonExperimental classroom (10:203)
|
|
09:00 - 09:15
|
Welcome
|
Johan Reimegård
|
|
09:15 - 10:00
|
RNA Introduction
|
Johan Reimegård
|
|
10:00 - 10:30
|
Coffee Break
|
|
|
10:30 - 12:00
|
RNA-Seq Introduction
|
Johan Reimegård
|
|
12:00 - 13:00
|
Lunch
|
|
|
13:00 - 14:00
|
Pre-alignment QC
|
Johan Reimegård
|
|
14:00 - 14:30
|
Coffee Break
|
|
|
14:30 - 16:00
|
Mapping
|
Johan Reimegård
|
|
12-Mar-2024TueExperimental classroom (10:203)
|
|
09:00 - 10:00
|
Post-alignment QC
|
Johan Reimegård
|
|
10:00 - 10:30
|
Coffee Break
|
|
|
10:30 - 12:00
|
Post-alignment QC
|
Johan Reimegård
|
|
12:00 - 13:00
|
Lunch
|
|
|
13:00 - 14:00
|
Quantification
|
Johan Reimegård
|
|
14:00 - 14:30
|
Coffee Break
|
|
|
15:30 - 16:00
|
QC examples
|
Johan Reimegård
|
|
13-Mar-2024WedExperimental classroom (10:203)
|
|
09:00 - 10:00
|
Annotation data
|
Nima Rafati
|
|
10:00 - 10:30
|
Coffee Break
|
|
|
10:30 - 12:00
|
Data preprocessing
|
Nima Rafati
|
|
12:00 - 13:00
|
Lunch
|
|
|
13:00 - 14:00
|
PCA
|
Julie Lorent
|
|
14:00 - 14:30
|
Coffee Break
|
|
|
15:00 - 16:00
|
Hierarchical Clustering
|
Nima Rafati
|
|
14-Mar-2024ThuExperimental classroom (10:203)
|
|
09:00 - 10:00
|
DGE
|
Julie Lorent
|
|
10:00 - 10:30
|
Coffee Break
|
|
|
10:30 - 12:00
|
DGE advanced
|
Julie Lorent
|
|
12:00 - 13:00
|
Lunch
|
|
|
13:00 - 14:00
|
GSA & GSEA
|
Nima Rafati
|
|
14:00 - 14:30
|
Coffee Break
|
|
|
14:30 - 16:00
|
GSA & GSEA
|
Nima Rafati
|
|
15-Mar-2024FriExperimental classroom (10:203)
|
|
09:00 - 09:30
|
Online Repositories
|
Johan Reimegård
|
|
09:30 - 10:00
|
Reading Bioinformatics
|
Johan Reimegård
|
|
10:00 - 10:30
|
Coffee Break
|
|
|
10:30 - 12:00
|
Pseudoaligners
|
Johan Reimegård
|
|
12:00 - 13:30
|
Lunch
|
|
|
13:30 - 14:00
|
Free Exercises
|
|
|
14:00 - 14:30
|
Coffee Break
|
|
|
14:30 - 15:00
|
Conclusion
|
Johan Reimegård
|
Date
Venue
Slides
Exercises
