Welcome to NBIS GitHub pages
If you are looking for a specific website, you need a URL in this format: nbisweden.github.io/repo. Here is a list of some of our most recently visited GitHub pages:
AGAT
Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/
https://nbisweden.github.io/AGAT/
Last Updated: 18-May-2026
workshop-snakemake-byoc
No description available
https://nbisweden.github.io/workshop-snakemake-byoc/
Last Updated: 28-May-2026
workshop-scRNAseq
Single cell RNA sequencing analysis course
https://nbisweden.github.io/workshop-scRNAseq/
Last Updated: 27-Apr-2026
workshop_omics_integration
Workshop in omics integration and systems biology
https://nbisweden.github.io/workshop_omics_integration/
Last Updated: 21-Oct-2024
raukr-2026
Raukr 2026 • NBIS Summer School • R Beyond the Basics
https://nbisweden.github.io/raukr-2026/
Last Updated: 09-May-2026
workshop-ngsintro
Workshop • Intro to Bioinformatics using NGS data • 5 days
https://nbisweden.github.io/workshop-ngsintro/
Last Updated: 16-Mar-2026
workshop-mlbiostatistics
Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
https://nbisweden.github.io/workshop-mlbiostatistics/
Last Updated: 06-Jun-2026
workshop-reproducible-research
NBIS/Elixir course: Tools for Reproducible Research
https://nbisweden.github.io/workshop-reproducible-research/
Last Updated: 23-Apr-2026
workshop-RNAseq
Workshop • Analysis of RNA-seq data
https://nbisweden.github.io/workshop-RNAseq/
Last Updated: 15-Mar-2024
single-cell_sib_scilifelab_2021
SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
Last Updated: 19-Sep-2021
single-cell_sib_scilifelab
SIB/Scilifelab autumn school in single cell omics 2019.
https://nbisweden.github.io/single-cell_sib_scilifelab/
Last Updated: 28-Oct-2019
workshop-r
Workshop • R Programming Foundations for Life Scientists • 5 days
https://nbisweden.github.io/workshop-r/
Last Updated: 28-May-2026
workshop-genome_annotation
This is the NBIS repository for the Genome Annotation Workshop.
https://nbisweden.github.io/workshop-genome_annotation/
Last Updated: 23-Apr-2021
SCoRe_user_doc
SCoRe user documentation
https://docs.score.nbis.se/
Last Updated: 05-Jun-2026
workshop-genome_assembly
No description available
https://nbisweden.github.io/workshop-genome_assembly/
Last Updated: 21-Dec-2018
workshop-genome_annotation_elixir
genome annotation course within ELIXIR
https://nbisweden.github.io/workshop-genome_annotation_elixir/
Last Updated: 07-May-2021
raukr-2024
NBIS Summer School • Advanced R for Bioinformatics
https://nbisweden.github.io/raukr-2024/
Last Updated: 26-May-2025
module-metadata-dm-practices
Metadata module for Data Management course (carpentries style)
https://nbisweden.github.io/module-metadata-dm-practices/
Last Updated: 19-Mar-2026
LocalEGA-helm
Helm chart to deploy LocalEGA to any kubernetes cluster.
https://nbisweden.github.io/LocalEGA-helm/
Last Updated: 10-Jan-2020
workshop-python
No description available
https://nbisweden.github.io/workshop-python/
Last Updated: 12-May-2025
raukr-2025
Raukr 2025 • NBIS Summer School • R Beyond the Basics
https://nbisweden.github.io/raukr-2025/
Last Updated: 23-Jun-2025
gc-bp-helm
Helm chart for grand challenge
https://nbisweden.github.io/gc-bp-helm/
Last Updated: 04-Mar-2024
easyshiny
Shiny web app builder for single-cell data
https://nbisweden.github.io/easyshiny/
Last Updated: 14-Apr-2023
workshop-howto
Howto setup a workshop
https://nbisweden.github.io/workshop-howto/
Last Updated: 22-Apr-2020
workshop-advanced-python
Workshop on advanced python lead by Sergio Netotea
https://nbisweden.github.io/workshop-advanced-python/
Last Updated: 04-May-2021
single-cell-pbl
Single Cell Project Based Learning
https://nbisweden.github.io/single-cell-pbl/
Last Updated: 10-Nov-2020
module-versioning-dm-practices
No description available
https://nbisweden.github.io/module-versioning-dm-practices/
Last Updated: 28-Mar-2025
module-organising-data-dm-practices
No description available
https://nbisweden.github.io/module-organising-data-dm-practices/
Last Updated: 19-Mar-2026
module-dmp-dm-practices
No description available
https://nbisweden.github.io/module-dmp-dm-practices/
Last Updated: 19-Mar-2026
ReprRes_G_Arnqvist_1305
Reproducible research repository for NBIS project G Arnqvist 1305
https://nbisweden.github.io/ReprRes_G_Arnqvist_1305/
Last Updated: 30-Aug-2019
Lingon
A d-mer based genome assembly pipeline
https://nbisweden.github.io/Lingon/
Last Updated: 04-Feb-2019