Welcome to NBIS GitHub pages
If you are looking for a specific website, you need a URL in this format: nbisweden.github.io/repo. Here is a list of some of our most recently visited GitHub pages:
AGAT
Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/
https://nbisweden.github.io/AGAT/
Last Updated: 29-Jul-2025
workshop-scRNAseq
Single cell RNA sequencing analysis course
https://nbisweden.github.io/workshop-scRNAseq/
Last Updated: 22-Sep-2025
workshop-reproducible-research
NBIS/Elixir course: Tools for Reproducible Research
https://nbisweden.github.io/workshop-reproducible-research/
Last Updated: 23-Sep-2025
workshop-neural-nets-and-deep-learning
NBIS workshop in Neural Nets and Deep Learning
https://nbisweden.github.io/workshop-neural-nets-and-deep-learning/
Last Updated: 22-May-2024
single-cell_sib_scilifelab_2021
SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
Last Updated: 19-Sep-2021
workshop_omics_integration
Workshop in omics integration and systems biology
https://nbisweden.github.io/workshop_omics_integration/
Last Updated: 21-Oct-2024
workshop-r
Workshop • R Programming Foundations for Life Scientists • 5 days
https://nbisweden.github.io/workshop-r/
Last Updated: 31-Oct-2024
workshop-mlbiostatistics
Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
https://nbisweden.github.io/workshop-mlbiostatistics/
Last Updated: 17-Jun-2025
workshop-genome_annotation
This is the NBIS repository for the Genome Annotation Workshop.
https://nbisweden.github.io/workshop-genome_annotation/
Last Updated: 23-Apr-2021
workshop-ngsintro
Workshop • Intro to Bioinformatics using NGS data • 5 days
https://nbisweden.github.io/workshop-ngsintro/
Last Updated: 28-Aug-2025
raukr-2024
NBIS Summer School • Advanced R for Bioinformatics
https://nbisweden.github.io/raukr-2024/
Last Updated: 26-May-2025
workshop-python
No description available
https://nbisweden.github.io/workshop-python/
Last Updated: 12-May-2025
workshop-genome_annotation_elixir
genome annotation course within ELIXIR
https://nbisweden.github.io/workshop-genome_annotation_elixir/
Last Updated: 07-May-2021
raukr
RaukR • R Beyond The Basics
http://raukr.nbis.se/
Last Updated: 21-Aug-2025
workshop-RNAseq
Workshop • Analysis of RNA-seq data
https://nbisweden.github.io/workshop-RNAseq/
Last Updated: 15-Mar-2024
raukr-2026
Raukr 2026 • NBIS Summer School • R Beyond the Basics
https://nbisweden.github.io/raukr-2026/
Last Updated: 02-Jul-2025
workshop-epigenomics
No description available
https://nbisweden.github.io/workshop-epigenomics/
Last Updated: 26-Sep-2024
raukr-2025
Raukr 2025 • NBIS Summer School • R Beyond the Basics
https://nbisweden.github.io/raukr-2025/
Last Updated: 23-Jun-2025
module-metadata-dm-practices
Metadata module for Data Management course (carpentries style)
https://nbisweden.github.io/module-metadata-dm-practices/
Last Updated: 28-Mar-2025
single-cell_sib_scilifelab
SIB/Scilifelab autumn school in single cell omics 2019.
https://nbisweden.github.io/single-cell_sib_scilifelab/
Last Updated: 28-Oct-2019
Grapevine
A natural language based workflow management system
https://nbisweden.github.io/Grapevine/
Last Updated: 09-Jun-2021
workshop-advanced-python
Workshop on advanced python lead by Sergio Netotea
https://nbisweden.github.io/workshop-advanced-python/
Last Updated: 04-May-2021
workshop-genome_assembly
No description available
https://nbisweden.github.io/workshop-genome_assembly/
Last Updated: 21-Dec-2018
module-organising-data-dm-practices
No description available
https://nbisweden.github.io/module-organising-data-dm-practices/
Last Updated: 28-Mar-2025
module-open-science-dm-practices
Open Science module for Data Management course (carpentries style)
https://nbisweden.github.io/module-open-science-dm-practices/
Last Updated: 05-Sep-2025
a_johansson_2020
Åsa Johansson partner project 2020
https://nbisweden.github.io/a_johansson_2020/
Last Updated: 20-Oct-2023
RaukR-2019
RaukR 2019 teaching materials
https://nbisweden.github.io/RaukR-2019/
Last Updated: 14-Jun-2021
workshop-scRNAseq-devel
Single cell RNA sequencing analysis course
https://nbisweden.github.io/workshop-scRNAseq-devel/
Last Updated: 28-Feb-2025
sauron
Website is at:
https://nbisweden.github.io/sauron/
Last Updated: 28-Apr-2021
raukrtemplate
Presentation & lab RMarkdown templates for RaukR course
https://nbisweden.github.io/raukrtemplate/
Last Updated: 19-Apr-2022
module-dmp-dm-practices
No description available
https://nbisweden.github.io/module-dmp-dm-practices/
Last Updated: 25-Aug-2025
genecovr
Gene body coverage in assemblies in R
https://nbisweden.github.io/genecovr/
Last Updated: 21-Dec-2023
canvas-integrations
No description available
https://nbisweden.github.io/canvas-integrations/
Last Updated: 11-Oct-2021
beacon-api-tests
Compliance tester and test cases for Beacons.
https://nbisweden.github.io/beacon-api-tests/
Last Updated: 25-Jun-2020
RaukR-2022
RaukR 2022 Teaching Materials
https://nbisweden.github.io/RaukR-2022/
Last Updated: 17-Jun-2022
Knox-ePouta
Connection between Knox (Sweden) and ePouta (Finland)
https://nbisweden.github.io/Knox-ePouta/
Last Updated: 20-Jan-2017