Representation of an alignment pair
Source:R/AllClasses.R, R/AllGenerics.R, R/methods-AlignmentPairs-class.R
AlignmentPairs-class.RdPairs subclass
Constructor for AlignmentPairs
Usage
AlignmentPairs(query, subject, ...)
# S4 method for GRanges,GRanges
AlignmentPairs(query, subject, ...)Arguments
- query
vectorized object representing query
- subject
vectorized object representing subject
- ...
Arguments to pass to constructor
Details
The AlignmentPairs class extends the
Pairs-class
Constructor
AlignmentPairs(query, subject, ...): Constructs an AlignmentPairs
object by aligning the vectors query and subject.