Cheatsheets

Quick reference resources for tools related to research software development and bioinformatics.

Name of the tool

Category: Type of tool

About
One line introduction about the tool
Links
Official cheatsheet | Official documentation | Other relevant link
RSE tools sessions
Session title

Apptainer 📦

Category: Container platform

About
Open-source fork of Singularity, used to package applications with their dependencies for HPC environments
Links
Official documentation | Coderefinery tutorial
RSE tools sessions
Introduction to Apptainer

Docker 🐳

Category: Container platform

About
Package applications with their dependencies
Links
Official cheatsheet | Official documentation
RSE tools sessions
None recorded yet.

Git 🌲

Category: Version control

About
Make and manage git repositories for version control of code, documentation, and other projects
Links
Official cheatsheet | Official documentation | Cheatsheet from GitHub
RSE tools sessions
Introduction to Git

Pixi ✨

Category: Package management

About
Powerful and fast software environment creator, package manager, and task runner
Links
Official quick start guide | Official documentation
RSE tools sessions
Introduction to Pixi

VSCode 💻

Category: Development environment

About
Powerful and customizable code editor owned and supported by Microsoft
Links
Official cheatsheet Windows | Official cheatsheet MacOS | Official documentation
RSE tools sessions
Introduction to VSCode