Note: The schedule and materials are not final and are subject to change.
| Time | Topic | Teacher |
|---|---|---|
|
13-Mar-2023MonTrippelrummet |
||
| 09:00 - 09:15 | Welcome | Johan Reimegård |
| 09:15 - 10:00 | RNA Introduction | Johan Reimegård |
| 10:00 - 10:30 | Coffee Break | |
| 10:30 - 12:00 | RNA-Seq Introduction | Johan Reimegård |
| 12:00 - 13:00 | Lunch | |
| 13:00 - 14:00 | Pre-alignment QC | Johan Reimegård |
| 14:00 - 14:30 | Coffee Break | |
| 14:30 - 16:00 | Mapping | Johan Reimegård |
|
14-Mar-2023TueTrippelrummet |
||
| 09:00 - 10:00 | Post-alignment QC | Johan Reimegård |
| 10:00 - 10:30 | Coffee Break | |
| 10:30 - 12:00 | Quantification | Johan Reimegård |
| 12:00 - 13:00 | Lunch | |
| 13:00 - 14:00 | Data preprocessing | Nima Rafati |
| 14:00 - 14:30 | Coffee Break | |
| 15:30 - 16:00 | Annotation data | Nima Rafati |
|
15-Mar-2023WedTrippelrummet |
||
| 09:00 - 10:00 | PCA | Paulo Czarnewski |
| 10:00 - 10:30 | Coffee Break | |
| 10:30 - 12:00 | Hierarchical Clustering | Paulo Czarnewski |
| 12:00 - 13:00 | Lunch | |
| 13:00 - 14:00 | DGE | Julie Lorent |
| 14:00 - 14:30 | Coffee Break | |
| 15:00 - 16:00 | GSA & GSEA | Paulo Czarnewski |
|
16-Mar-2023ThuTrippelrummet |
||
| 09:00 - 10:00 | DGE advanced | Paulo Czarnewski |
| 10:00 - 10:30 | Coffee Break | |
| 10:30 - 11:30 | Online Repositories | Paulo Czarnewski |
| 11:30 - 12:00 | Reading Bioinformatics | Paulo Czarnewski |
| 12:00 - 13:00 | Lunch | |
| 13:00 - 14:00 | Pseudoaligners | Johan Reimegård |
| 14:00 - 14:30 | Coffee Break | |
| 14:30 - 15:30 | Free Exercises | |
| 15:30 - 16:00 | Conclusion | Johan Reimegård |
Date Venue Slides Exercises