Welcome to RaukR 2021

# Welcome to RaukR 2021
## RaukR 2021 • Advanced R for Bioinformatics
### <b>Marcin Kierczak</b>
### NBIS, SciLifeLab

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* SciLifeLab - one of the three biggest national research infrastructures in Sweden (Mark-IV and ESS)
* NBIS - a SciLifeLab Bioinformatics Platforms
* a national distributed network of around 120 bioinformaticians
* support + training + development  
  
<img src="intro_assets/Group_NBIS.png" width="1872" style="display: block; margin: auto auto auto 0;" />

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* idea born about 2015, crystallized around 2017
* first RaukR in 2018
* in 2018 - 45 participants (30 from Sweden and 15 international)
* subsidized by SciLifeLab
* the first advanced topic course at NBIS
* typically hosted at Campus Gotland, a part of Uppsala University

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* 2018 - 45 participants, 10 teachers, guests: Martin Morgan, Paula Moraga, Olle Jansson, Lové Dalen
* 2019 - 44 participants, 10 teachers, guests: Jenny Bryan, Yihui Xie, Lové Dalen
* 2020 - canceled

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* 2021 - 30 participants

* teachers:
    + Marcin Kierczak, Uppsala - organiser
    + Sebastian DiLorenzo, Uppsala - organiser
    + Roy Francis, Uppsala - RaukR core staff 
    + Nina Norgren, Umeå - NBIS Training Vice Coordinator
    + Ashfaq Ali, Lund 
    + Mun-Gwan Hong, Stockholm
    + Julie Lorent, Stockholm
    + Nikolay Oskolkov, Lund
    + Björn Viklund, Uppsala
    + Lokeshwaran Manoharan, Lund
    
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* guest lecturers:
    + Jenny Bryan - RStudio, Hadley Wickham's team
    + Christophe Dervieux - RStudio, Yihui Xie's team
    + Yihui Xie - software engineer at RStudio
    + Max Kuhn, RStudio
    
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* social media: #RaukR | Twitter | raukr.slack.com | HackMD

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* either own data or supplied dataset
* a package
* use R markdown
* collaborative effort using GitHub
* assigned tutor
* ideally 3 people per project
* short presentation (~10min per group) on the last day

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* This presentation was created in RStudio using [`remarkjs`](https://github.com/gnab/remark) framework through R package [`xaringan`](https://github.com/yihui/xaringan).
* For R Markdown, see <http://rmarkdown.rstudio.com>
* For R Markdown presentations, see <https://rmarkdown.rstudio.com/lesson-11.html>

```r
R.version
```

```
##                _                           
## platform       x86_64-apple-darwin17.0     
## arch           x86_64                      
## os             darwin17.0                  
## system         x86_64, darwin17.0          
## status                                     
## major          4                           
## minor          0.3                         
## year           2020                        
## month          10                          
## day            10                          
## svn rev        79318                       
## language       R                           
## version.string R version 4.0.3 (2020-10-10)
## nickname       Bunny-Wunnies Freak Out
```

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# Thank you